Fitness data for ABIE53_000052 in Paraburkholderia graminis OAS925

tetratricopeptide (TPR) repeat protein
SEED: FOG: TPR repeat

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


Add gene:

Or see all 481 experiments or choose conditions

group condition fitness t score  
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.4 -2.8 compare
carbon source D-Xylose (C) -0.4 -2.8 compare
carbon source D-Gluconic Acid (C) -0.4 -2.2 compare
soil extract Chlorogenic 5 mM in soil extract -0.4 -2.4 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.3 -2.5 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.3 -1.9 compare
stress RCH2_defined_glucose_5mM with caffeic 0.5 mM -0.3 -1.9 compare
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar_0.5%; Collection=R2A_with_kan10; Time=21days -0.3 -1.8 compare
carbon source L-Serine (C) -0.3 -2.0 compare
carbon source L-Rhamnose (C) -0.3 -1.7 compare
soil extract Indole-3-pyruvic 5 mM in soil extract +0.3 +1.9 compare
replicable vector efficiency Conjugation on LB_DAP agar plate with WM3064 carrying pBBR1-MCS5; outgrowth in LB_gent50 +0.3 +2.1 compare
tn7 efficiency Conjugation on LB_DAP agar plate with WM3064 carrying pRH19; outgrowth in LB_gent50 +0.3 +2.1 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.3 +1.9 compare
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar_0.5%; Collection=R2A_with_kan10; Time=21days +0.3 +1.8 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days +0.4 +2.0 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.4 +2.5 compare
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.4 +2.5 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days +0.5 +2.7 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=potting_mix; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days +0.5 +2.9 compare