Fitness data for BT4722 in Bacteroides thetaiotaomicron VPI-5482

RNA polymerase ECF-type sigma factor (NCBI ptt file)
SEED: RNA polymerase ECF-type sigma factor
KEGG: RNA polymerase sigma-70 factor, ECF subfamily

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
phage SJC16_cps8_10MOI -0.9 -3.7 compare
carbon source a-Cyclodextrin 2.5 mg/ml (C) -0.9 -2.8 compare
phage DAC16_cps7_1MOI -0.7 -3.7 compare
stress BHIS with Zinc Pyrithione 0.05 mM -0.7 -3.2 compare
stress Varel_Bryant_medium_Glucose with Phenazine ethosulfate 0.2 mM -0.7 -2.5 compare
mouse Post-colonization (Day 4) - Cage1B;Mouse4 -0.7 -2.8 compare
carbon source Pectin from apple; autoclaved 2.5 mg/ml (C) -0.7 -3.3 compare
phage DAC17_cps3_0.1MOI -0.6 -2.6 compare
phage HNL05_cps7_0.1MOI -0.6 -2.8 compare
control NoPhage -0.6 -2.0 compare
phage HNL05_cps7_1MOI -0.6 -2.3 compare
carbon source beta-Cyclodextrin 2.5 mg/ml (C) -0.6 -2.6 compare
phage DAC15 _cps3_0.1MOI -0.6 -2.4 compare
stress Varel_Bryant_medium_Glucose with Bile salts 0.5 mg/mL; pH 7 +0.6 +2.7 compare
stress BHIS with Simvastatin 30 uM +0.7 +1.8 compare
carbon source D-Trehalose (C) +0.7 +3.4 compare
stress BHIS with Doxycycline hyclate 0.0001953125 mM +0.8 +2.2 compare
varel_bryant_medium_glucose Varel_Bryant_medium_Glucose +0.8 +3.5 compare
stress BHIS with Dimetridazole 0.025 mM +0.9 +2.4 compare
stress BHIS with Chloride 350 mM +1.0 +2.2 compare