Fitness data for BT4709 in Bacteroides thetaiotaomicron VPI-5482

glycosyl hydrolase (NCBI ptt file)
SEED: Endo-beta-N-acetylglucosaminidase F2

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
carbon source D-Trehalose 20mM (C) -1.6 -4.7 compare
mouse_post_colonization Post-colonization (Day 6) - Cage5;Mouse5 -1.2 -4.4 compare
mouse_peg_treatment PEG (Day 3) - Cage2;Mouse1 -0.9 -2.8 compare
mouse_coculture cage1; mouse1; day3; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003 -0.8 -2.2 compare
mouse_post_colonization Post-colonization (Day 10) - Cage5;Mouse5 -0.8 -2.9 compare
mouse_post_colonization Post-colonization (Day 10) - Cage2;Mouse1 -0.7 -3.3 compare
nitrogen source L-Glutamine (N); Varel_Bryant_medium_Glucose_DTT_noNitrogen -0.7 -2.5 compare
nitrogen source L-Serine (N); Varel_Bryant_medium_Glucose_DTT_noNitrogen -0.7 -2.6 compare
mouse Post-colonization (Day 4) - Cage1A;Mouse2 -0.7 -2.7 compare
mouse_post_colonization Post-colonization (Day 6) - Cage6;Mouse1 -0.7 -3.0 compare
stress Varel_Bryant_medium_Glucose with Sulfamethizole 0.2 mM -0.7 -2.3 compare
stress Varel_Bryant medium with Chlorhexidine diacetate salt 0.0015 mM +0.7 +2.9 compare
phage SJC15_cps8_1MOI +0.7 +2.2 compare
nitrogen source D-Glucosamine Hydrochloride (N) +0.7 +3.1 compare
stress Bile salts 0.25 mg/ml +0.7 +2.9 compare
carbon source Heparin from porcine intestinal mucosa (C) +0.7 +2.3 compare
stress BHIS with Chlorpromazine 0.2 mM +0.7 +2.5 compare
stress Varel_Bryant_medium_Glucose with Levofloxacin 0.0015625 mM +0.7 +3.3 compare
nitrogen source L-Glutamine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen +0.7 +2.6 compare
stress Varel_Bryant_medium_Glucose with Econazole nitrate salt 0.025 mM +0.9 +2.7 compare