Fitness data for BT4647 in Bacteroides thetaiotaomicron VPI-5482

RNA polymerase ECF-type sigma factor (NCBI ptt file)
SEED: RNA polymerase ECF-type sigma factor
KEGG: RNA polymerase sigma-70 factor, ECF subfamily

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
carbon source D-Trehalose 20mM (C) -1.3 -2.9 compare
nitrogen source L-Leucine (N) -1.3 -2.9 compare
stress Varel_Bryant medium with Chlorpromazine 0.05 mM -1.2 -3.1 compare
carbon source amylopectin from maize -1.1 -2.8 compare
stress BHIS with Simvastatin 30 uM -1.0 -2.3 compare
stress BHIS with Benzethonium chloride 0.003 mM -0.9 -2.5 compare
carbon source Agro_defined_trehalose 1x (C) -0.9 -2.1 compare
stress BHIS with Fusidic 0.002 mg/ml -0.9 -2.0 compare
mouse Post-colonization (Day 2) - Cage1A;Mouse3 -0.9 -2.2 compare
stress BHIS with perchlorate 100 mM -0.9 -3.2 compare
stress Varel_Bryant medium with Tetrazolium violet 0.025 mM -0.9 -2.5 compare
carbon source Pectic galactan from potato; filtered 2.5 mg/ml (C) +0.8 +3.0 compare
mouse_coculture cage1; mouse2; day2; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003 +0.8 +2.8 compare
carbon source Amylopectin from Potato; autoclaved 2.5 mg/ml (C) +0.9 +2.9 compare
stress BHIS with Doxycycline hyclate 0.0001953125 mM +0.9 +2.2 compare
carbon source (+)-Arabinogalactan; autoclaved 2.5 mg/ml (C) +0.9 +2.8 compare
stress BHIS with Thioridazine 0.0125 mM +0.9 +1.4 compare
carbon source Dextrin from potato starch; autoclaved 2.5 mg/ml (C) +0.9 +2.9 compare
stress Varel_Bryant_medium_Glucose with Trimethoprim 0.0125 mM +1.0 +2.7 compare
stress Varel_Bryant_medium_Glucose with Zinc Pyrithione 0.025 mM +1.0 +3.6 compare