Fitness data for BT4644 in Bacteroides thetaiotaomicron VPI-5482

putative anti-sigma factor (NCBI ptt file)
SEED: Possible anti-sigma factor

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 3.5)


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group condition fitness t score  
mouse_coculture cage1; mouse1; day4; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003 -5.1 -3.5 compare
mouse_coculture cage1; mouse1; day5; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003 -4.9 -3.4 compare
stress Varel_Bryant_medium_Glucose with Chenodeoxycholic 0.5 mg/ml -4.7 -3.3 compare
mouse_coculture cage1; mouse3; day4; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003 -4.7 -4.5 compare
mouse_post_colonization Post-colonization (Day 8) - Cage3;Mouse1 -4.0 -2.7 compare
mouse_post_colonization Post-colonization (Day 8) - Cage4;Mouse4 -3.9 -2.7 compare
carbon source Heparin from porcine intestinal mucosa (C) -3.9 -3.8 compare
mouse_post_colonization Post-colonization (Day 10) - Cage2;Mouse1 -3.9 -2.7 compare
mouse_coculture cage1; mouse2; day4; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003 -3.9 -4.6 compare
mouse_coculture cage1; mouse3; day5; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003 -3.8 -4.5 compare
carbon source Rhamnogalacturonan - from potato (C) -3.8 -2.6 compare
mouse_post_colonization Post-colonization (Day 8) - Cage5;Mouse4 -3.8 -2.6 compare
mouse_post_colonization Post-colonization (Day 6) - Cage3;Mouse2 -3.7 -3.6 compare
stress Varel_Bryant_medium_Glucose with Chenodeoxycholic 0.25 mg/ml -3.7 -5.0 compare
mouse_post_colonization Post-colonization (Day 8) - Cage1;Mouse2 -3.6 -2.5 compare
stress BHIS with Chlorpromazine 0.1 mM -3.6 -3.5 compare
mouse_post_colonization Post-colonization (Day 8) - Cage5;Mouse5 -3.6 -2.5 compare
mouse_post_colonization Post-colonization (Day 10) - Cage4;Mouse5 -3.5 -2.4 compare
carbon source Rhamnogalacturonan - from potato (C) -3.5 -4.2 compare
phage SJC16_cps8_10MOI +3.7 +7.2 compare