Fitness data for BT4636 in Bacteroides thetaiotaomicron VPI-5482

RNA polymerase ECF-type sigma factor (NCBI ptt file)
SEED: RNA polymerase ECF-type sigma factor

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
carbon source (+)-Arabinogalactan (C) -1.5 -5.1 compare
carbon source Red Arabinan from sugar-beet (C) -1.1 -3.5 compare
stress Varel_Bryant_medium_Glucose with Sulfamethizole 0.1 mM -1.0 -3.0 compare
stress BHIS with Deoxycholic 0.2 mg/ml -1.0 -4.0 compare
stress Varel_Bryant_medium_Glucose with Chlorpromazine 0.1 mM -1.0 -2.8 compare
stress Varel_Bryant_medium_Glucose with Econazole nitrate salt 0.0125 mM -1.0 -3.4 compare
stress Varel_Bryant_medium_Glucose with Dimethyl Sulfoxide 0.05 vol% -0.9 -3.7 compare
carbon source Hyaluronic from Streptococcus equi -0.9 -2.5 compare
stress Varel_Bryant_medium_Glucose with Dimethyl Sulfoxide 0.1 vol% -0.9 -4.1 compare
stress BHIS with Anhydrotetracycline 0.00078125 mM -0.9 -4.0 compare
nitrogen source L-Glutamine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen -0.9 -2.4 compare
carbon source dextran, Mw ~200,000 (C) -0.9 -2.4 compare
stress Varel_Bryant_medium_Glucose with Ramoplanin 0.0015625 mM -0.9 -3.1 compare
stress Varel_Bryant_medium_Glucose with Irgasan 0.025 mM -0.8 -2.9 compare
carbon source Galactan from Potato; autoclaved 2.5 mg/ml (C) -0.8 -3.4 compare
carbon source 6-O-Acetyl-D-glucose (C) -0.8 -2.7 compare
carbon source Red Arabinan from sugar-beet -0.8 -3.1 compare
mouse_post_colonization Post-colonization (Day 8) - Cage2;Mouse3 -0.8 -3.2 compare
stress Varel_Bryant_medium_Glucose with Metronidazole 0.0015625 mM -0.8 -3.3 compare
mouse_peg_treatment PEG (Day 3) - Cage2;Mouse1 +1.1 +1.5 compare