Fitness data for BT4597 in Bacteroides thetaiotaomicron VPI-5482

endopeptidase Clp ATP-binding chain B (NCBI ptt file)
SEED: ClpB protein
KEGG: ATP-dependent Clp protease ATP-binding subunit ClpB

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
stress BHIS with Oxytetracycline 0.0001953125 mM -1.3 -3.5 compare
stress BHIS with Oxytetracycline 0.000390625 mM -1.1 -3.2 compare
mouse_coculture cage1; mouse3; day3; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003 -1.1 -4.6 compare
mouse_coculture cage1; mouse2; day5; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003 -1.1 -4.4 compare
mouse_post_colonization Post-colonization (Day 10) - Cage1;Mouse4 -1.1 -3.7 compare
mouse_coculture cage1; mouse2; day2; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003 -1.1 -3.1 compare
mouse_coculture cage1; mouse2; day4; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003 -1.0 -3.7 compare
mouse_coculture cage1; mouse3; day5; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003 -1.0 -3.9 compare
mouse_peg_treatment PEG (Day 1 ) - Cage1;Mouse5 -0.9 -3.3 compare
mouse_post_colonization Post-colonization (Day 14) - Cage1;Mouse3 -0.9 -3.2 compare
stress BHIS with Rifampicin 0.0000244140625 mM -0.9 -2.9 compare
carbon source polygalacturonic -0.9 -2.9 compare
mouse_coculture cage1; mouse2; day3; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003 -0.9 -3.2 compare
mouse_post_colonization Post-colonization (Day 10) - Cage5;Mouse5 -0.9 -3.1 compare
stress BHIS with Chlorhexidine diacetate salt 0.0015625 mM -0.8 -3.4 compare
mouse_coculture cage1; mouse3; day4; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003 -0.8 -3.0 compare
mouse_post_colonization Post-colonization (Day 10) - Cage6;Mouse2 -0.8 -3.1 compare
mouse_coculture cage1; mouse1; day4; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003 -0.8 -2.6 compare
stress Varel_Bryant_medium_Glucose with Anhydrotetracycline 0.0125 mM +0.8 +4.0 compare
stress BHIS with Thioridazine 0.0125 mM +1.1 +3.5 compare