Fitness data for BT4538 in Bacteroides thetaiotaomicron VPI-5482

Type I restriction enzyme EcoR124II M protein (NCBI ptt file)
SEED: Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72)
KEGG: type I restriction enzyme M protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.0)


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group condition fitness t score  
mouse_post_colonization Post-colonization (Day 12) - Cage7;Mouse3 -1.4 -6.4 compare
stress BHIS with Cephalothin 0.625 mg/ml -1.2 -4.4 compare
mouse_post_colonization Post-colonization (Day 6) - Cage6;Mouse2 -1.2 -4.8 compare
mouse_post_colonization Post-colonization (Day 6) - Cage5;Mouse5 -1.1 -4.9 compare
stress BHIS with DAMPA 60 uM -1.1 -5.5 compare
stress BHIS with Trimethoprim 0.00625 mM -1.1 -4.4 compare
mouse_post_colonization Post-colonization (Day 12) - Cage4;Mouse5 -1.1 -5.4 compare
mouse_post_colonization Post-colonization (Day 10) - Cage5;Mouse5 -1.1 -5.4 compare
control NoPhage -1.1 -5.1 compare
mouse_peg_treatment PEG (Day 1 ) - Cage1;Mouse5 -1.0 -4.8 compare
mouse_post_colonization Post-colonization (Day 10) - Cage5;Mouse2 -1.0 -5.4 compare
mouse_post_colonization Post-colonization (Day 10) - Cage1;Mouse2 -1.0 -4.4 compare
phage SJC15_cps8_1MOI -1.0 -4.5 compare
mouse_post_colonization Post-colonization (Day 6) - Cage1;Mouse3 -1.0 -4.9 compare
mouse_post_colonization Post-colonization (Day 6) - Cage1;Mouse4 -1.0 -5.6 compare
mouse_post_colonization Post-colonization (Day 12) - Cage6;Mouse1 -1.0 -4.7 compare
phage SJC16_cps8_1MOI -1.0 -4.2 compare
stress BHIS with Benzethonium chloride 0.002 mM -1.0 -4.6 compare
carbon source B-glucan from yeast; autoclaved 2.5 mg/ml (C) +1.4 +7.9 compare
carbon source B-glucan from yeast; autoclaved 2.5 mg/ml (C) +1.4 +9.1 compare