Fitness data for BT4517 in Bacteroides thetaiotaomicron VPI-5482

Type I restriction enzyme EcoKI R protein (NCBI ptt file)
SEED: Type I restriction-modification system, restriction subunit R (EC 3.1.21.3)
KEGG: type I restriction enzyme, R subunit

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
carbon source a-Cyclodextrin 2.5 mg/ml (C) -0.5 -3.2 compare
nitrogen source L-aspartic (N) -0.4 -2.6 compare
carbon source Starch from potato -0.4 -2.5 compare
carbon source Starch soluble; autoclaved 2.5 mg/ml (C) -0.3 -2.5 compare
carbon source D-Glucose (C) -0.3 -2.0 compare
nitrogen source D-Serine (N) -0.3 -2.0 compare
stress BHIS with Benzethonium chloride 0.00078125 mM +0.3 +2.2 compare
stress BHIS with Benzethonium chloride 0.002 mM +0.3 +2.1 compare
stress BHIS with Zinc Pyrithione 0.025 mM +0.3 +2.1 compare
mouse_post_colonization Post-colonization (Day 6) - Cage6;Mouse2 +0.3 +2.1 compare
mouse_post_colonization Post-colonization (Day 12) - Cage5;Mouse4 +0.3 +2.0 compare
mouse_coculture cage1; mouse3; day4; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003 +0.3 +2.2 compare
mouse_post_colonization Post-colonization (Day 1) - Cage5;Mouse4 +0.3 +2.4 compare
nitrogen source L-Asparagine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen +0.3 +2.1 compare
stress BHIS with 5-Fluorouracil 0.1 mM +0.3 +2.0 compare
stress BHIS with Sulfaquinoxaline 0.1 mM +0.3 +2.4 compare
mouse_peg_treatment PEG (Day 2) - Cage4;Mouse1 +0.4 +1.9 compare
mouse_post_colonization Post-colonization (Day 1) - Cage6;Mouse1 +0.4 +2.1 compare
stress BHIS with Thioridazine 0.0125 mM +0.4 +1.7 compare
mouse_post_colonization Post-colonization (Day 1) - Cage2;Mouse2 +0.5 +2.9 compare