Fitness data for BT4108 in Bacteroides thetaiotaomicron VPI-5482

conserved hypothetical protein (NCBI ptt file)
SEED: Rhamnogalacturonides degradation protein RhiN

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
carbon source Pectin from apple; filtered 1 mg/ml (C) -2.0 -5.1 compare
carbon source polygalacturonic (ultrapure); filtered 2.5 mg/ml (C) -1.9 -5.4 compare
carbon source Pectin from apple; filtered 1 mg/ml (C) -1.7 -5.2 compare
carbon source polygalacturonic (ultrapure); filtered 2.5 mg/ml (C) -1.7 -5.0 compare
carbon source polygalacturonic (ultrapure); autoclaved 2.5 mg/ml (C) -1.7 -5.1 compare
carbon source polygalacturonic (ultrapure); autoclaved 2.5 mg/ml (C) -1.4 -4.5 compare
carbon source polygalacturonic; autoclaved 2.5 mg/ml (C) -1.4 -4.5 compare
carbon source Rhamnogalacturonan - from potato; autoclaved 2.5 mg/ml (C) -1.3 -4.4 compare
carbon source polygalacturonic (C) -1.2 -4.8 compare
carbon source Pectin from apple; autoclaved 2.5 mg/ml (C) -1.2 -4.4 compare
carbon source Pectin from citrus peel; autoclaved 2.5 mg/ml (C) -1.2 -4.2 compare
carbon source polygalacturonic; autoclaved 2.5 mg/ml (C) -1.2 -4.4 compare
carbon source Pectin from apple; autoclaved 2.5 mg/ml (C) -1.0 -4.0 compare
carbon source Rhamnogalacturonan - from potato (C) -1.0 -4.6 compare
carbon source Rhamnogalacturonan - from potato; autoclaved 2.5 mg/ml (C) -1.0 -4.0 compare
carbon source Pectin from citrus peel; autoclaved 2.5 mg/ml (C) -0.9 -3.7 compare
stress BHIS with Dimetridazole 0.00625 mM -0.9 -3.4 compare
mouse_peg_treatment PEG (Day 1) - Cage3;Mouse1 -0.9 -3.3 compare
mouse_post_colonization Post-colonization (Day 10) - Cage4;Mouse1 -0.8 -3.5 compare
stress BHIS with Doxycycline hyclate 0.0001953125 mM +1.2 +4.9 compare