Fitness data for BT4020 in Bacteroides thetaiotaomicron VPI-5482

conserved hypothetical protein (NCBI ptt file)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
mouse_peg_treatment PEG (Day 1) - Cage4;Mouse1 -1.3 -4.3 compare
mouse_coculture cage1; mouse1; day5; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003 -1.2 -4.5 compare
carbon source a-Cyclodextrin 2.5 mg/ml (C) -1.0 -3.4 compare
mouse_post_colonization Post-colonization (Day 12) - Cage3;Mouse4 -1.0 -3.3 compare
stress Varel_Bryant_medium_Glucose with Phenazine ethosulfate 0.1 mM -1.0 -3.2 compare
mouse_post_colonization Post-colonization (Day 14) - Cage7;Mouse3 -0.9 -2.3 compare
nitrogen source Glycine (N) -0.9 -2.9 compare
mouse_peg_treatment PEG (Day 3) - Cage2;Mouse1 -0.9 -1.8 compare
stress BHIS with Trimethoprim 0.00625 mM -0.9 -2.0 compare
mouse Post-dosage t1 (Day 1) - Cage1C;Mouse1 -0.9 -1.8 compare
mouse_coculture cage1; mouse1; day2; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003 -0.8 -3.0 compare
mouse_post_colonization Post-colonization (Day 12) - Cage6;Mouse1 -0.8 -2.9 compare
carbon source (+)-Arabinogalactan (C) -0.8 -1.9 compare
mouse_post_colonization Post-colonization (Day 10) - Cage4;Mouse5 -0.8 -2.5 compare
mouse_peg_treatment PEG (Day 1) - Cage3;Mouse1 -0.8 -1.9 compare
stress Varel_Bryant_medium_Glucose with Trimethoprim 0.025 mM -0.8 -1.4 compare
mouse_post_colonization Post-colonization (Day 14) - Cage3;Mouse1 -0.8 -2.3 compare
stress Varel_Bryant_medium_Glucose with Econazole nitrate salt 0.025 mM +0.8 +2.1 compare
carbon source Starch from potato (C) +0.8 +2.9 compare
mouse_post_colonization Post-colonization (Day 1) - Cage6;Mouse1 +1.1 +2.3 compare