Fitness data for BT4009 in Bacteroides thetaiotaomicron VPI-5482

integrase (NCBI ptt file)
SEED: integrase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
mouse_post_colonization Post-colonization (Day 10) - Cage1;Mouse2 -1.3 -5.2 compare
mouse Post-colonization (Day 7) - Cage1C;Mouse1 -0.8 -3.5 compare
phage SJC15_cps8_1MOI -0.7 -2.5 compare
mouse_peg_treatment PEG (Day 3) - Cage2;Mouse1 -0.7 -2.4 compare
carbon source dextran, Mw ~200,000 (C) -0.7 -3.0 compare
phage DAC16_cps7_0.1MOI -0.6 -2.6 compare
mouse_post_colonization Post-colonization (Day 12) - Cage4;Mouse1 -0.6 -2.0 compare
mouse_post_colonization Post-colonization (Day 3) - Cage1;Mouse2 -0.6 -2.9 compare
carbon source D-Trehalose 20mM (C) +0.6 +2.0 compare
phage SJC12_cps8_0.1MOI +0.6 +2.1 compare
stress BHIS with Ciprofloxacin Hydrochloride 0.025 mM +0.6 +3.1 compare
carbon source D-Glucose (C) +0.6 +2.8 compare
carbon source a-Cyclodextrin 2.5 mg/ml (C) +0.6 +3.2 compare
carbon source Galactan from Potato; filtered 2.5 mg/ml (C) +0.6 +3.3 compare
stress Varel_Bryant_medium_Glucose with Cefoxitin 0.0125 mM +0.6 +3.6 compare
nitrogen source Ammonium chloride (N) +0.6 +3.6 compare
nitrogen source L-aspartic (N) +0.7 +2.8 compare
nitrogen source L-Leucine (N) +0.7 +3.6 compare
stress BHIS with Vancomycin Hydrochloride from Streptomyces orientalis 0.0125 mM +0.9 +1.6 compare
nitrogen source L-Glutamine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen +1.5 +3.5 compare