Fitness data for BT3983 in Bacteroides thetaiotaomicron VPI-5482

putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file)
SEED: SusC, outer membrane protein involved in starch binding

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
mouse Post-colonization (Day 7) - Cage1A;Mouse1 -0.6 -3.7 compare
stress BHIS with Cephalothin 0.2 mM -0.5 -3.1 compare
mouse Post-colonization (Day 4) - Cage1A;Mouse2 -0.4 -3.1 compare
phage SJC16_cps8_1MOI -0.4 -2.4 compare
stress Varel_Bryant_medium_Glucose with Chenodeoxycholic 0.5 mg/ml -0.4 -2.8 compare
stress Varel_Bryant_medium_Glucose with Phenazine ethosulfate 0.2 mM -0.4 -2.2 compare
mouse Post-colonization (Day 4) - Cage1C;Mouse3 -0.4 -2.6 compare
stress BHIS with Chlorpromazine 0.1 mM -0.3 -2.1 compare
stress BHIS with Chloride 350 mM +0.4 +2.3 compare
mouse_coculture cage1; mouse3; day4; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003 +0.4 +2.6 compare
mouse_post_colonization Post-colonization (Day 12) - Cage4;Mouse5 +0.4 +2.9 compare
mouse_post_colonization Post-colonization (Day 6) - Cage6;Mouse2 +0.4 +2.7 compare
mouse_post_colonization Post-colonization (Day 8) - Cage3;Mouse1 +0.4 +3.2 compare
mouse_peg_treatment PEG (Day 1) - Cage2;Mouse1 +0.4 +2.9 compare
mouse_coculture cage1; mouse1; day5; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003 +0.4 +2.9 compare
mouse_post_colonization Post-colonization (Day 14) - Cage1;Mouse1 +0.5 +3.4 compare
mouse_coculture cage1; mouse3; day5; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003 +0.5 +3.8 compare
mouse_peg_treatment PEG (Day 1) - Cage3;Mouse1 +0.6 +3.9 compare
mouse_post_colonization Post-colonization (Day 14) - Cage3;Mouse1 +0.6 +4.2 compare
mouse_peg_treatment PEG (Day 3) - Cage3;Mouse2 +0.6 +3.4 compare