Fitness data for BT3798 in Bacteroides thetaiotaomicron VPI-5482

conserved hypothetical protein (NCBI ptt file)
SEED: Alpha-L-fucosidase (EC 3.2.1.51)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
stress BHIS with Simvastatin 30 uM -1.4 -3.7 compare
mouse_post_colonization Post-colonization (Day 12) - Cage2;Mouse1 -1.1 -3.8 compare
mouse_peg_treatment PEG (Day 3) - Cage3;Mouse2 -1.1 -2.6 compare
carbon source a-Cyclodextrin (C) -0.8 -3.1 compare
carbon source L-Arabinose (C) -0.8 -3.2 compare
nitrogen source Casamino Acids (N) +0.8 +2.8 compare
phage SJC16_cps8_10MOI +0.8 +2.6 compare
phage DAC15 _cps3_0.1MOI +0.8 +3.0 compare
stress BHIS with Cefoxitin 0.025 mM +0.8 +2.5 compare
mouse_coculture cage1; mouse1; day4; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003 +0.8 +3.1 compare
carbon source NAG (C) +0.9 +3.2 compare
phage SJC15_cps8_1MOI +0.9 +1.9 compare
carbon source D-Ribose (C) +0.9 +2.5 compare
mouse_coculture cage1; mouse3; day5; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003 +0.9 +3.0 compare
phage SJC16_cps8_1MOI +0.9 +2.5 compare
mouse_coculture cage1; mouse1; day5; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003 +0.9 +4.6 compare
phage SJC15_cps8_1MOI +1.0 +2.7 compare
stress Varel_Bryant_medium_Glucose with Econazole nitrate salt 0.025 mM +1.0 +2.8 compare
mouse_coculture cage1; mouse2; day4; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003 +1.1 +3.6 compare
mouse_coculture cage1; mouse2; day5; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003 +1.3 +4.7 compare