Fitness data for BT3797 in Bacteroides thetaiotaomicron VPI-5482

conserved hypothetical protein (NCBI ptt file)
SEED: Raffinose synthase (Sip1 seed imbibition) protein homolog

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
mouse_post_colonization Post-colonization (Day 1) - Cage6;Mouse1 -0.7 -3.0 compare
mouse_post_colonization Post-colonization (Day 8) - Cage7;Mouse1 -0.6 -3.4 compare
mouse_post_colonization Post-colonization (Day 10) - Cage5;Mouse3 -0.6 -3.2 compare
mouse_post_colonization Post-colonization (Day 3) - Cage4;Mouse1 -0.5 -2.8 compare
carbon source Glycogen; autoclaved 2.5 mg/ml (C) -0.5 -2.9 compare
mouse_post_colonization Post-colonization (Day 3) - Cage3;Mouse1 -0.5 -2.8 compare
carbon source Rhamnogalacturonan - from potato; autoclaved 2.5 mg/ml (C) -0.5 -2.9 compare
mouse_post_colonization Post-colonization (Day 2) - Cage2;Mouse3 -0.5 -2.5 compare
phage DAC20_cps8_1MOI -0.5 -2.7 compare
stress BHIS with Irgasan 0.0125 mM -0.5 -2.2 compare
mouse_post_colonization Post-colonization (Day 12) - Cage5;Mouse2 -0.5 -2.2 compare
mouse_post_colonization Post-colonization (Day 1) - Cage1;Mouse3 +0.5 +2.5 compare
mouse_coculture cage1; mouse1; day4; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003 +0.5 +2.3 compare
mouse_coculture cage1; mouse1; day5; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003 +0.5 +2.0 compare
stress BHIS with Simvastatin 30 uM +0.6 +2.7 compare
carbon source Hyaluronic from Streptococcus equi +0.6 +2.6 compare
carbon source Hyaluronic from Streptococcus equi +0.6 +2.5 compare
mouse_coculture cage1; mouse3; day5; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003 +0.7 +3.0 compare
mouse_coculture cage1; mouse2; day4; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003 +0.9 +3.9 compare
mouse_coculture cage1; mouse2; day5; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003 +1.1 +4.2 compare