Fitness data for BT3608 in Bacteroides thetaiotaomicron VPI-5482

conserved hypothetical protein (NCBI ptt file)
SEED: Sialidase (EC 3.2.1.18)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
mouse_peg_treatment PEG (Day 3) - Cage2;Mouse1 -1.7 -3.3 compare
mouse_peg_treatment PEG (Day 1) - Cage4;Mouse1 -1.7 -3.4 compare
carbon source Red Arabinan from sugar-beet (C) -1.3 -3.3 compare
carbon source Red Arabinan from sugar-beet -1.1 -2.9 compare
mouse_post_colonization Post-colonization (Day 12) - Cage7;Mouse3 -1.0 -2.7 compare
carbon source Hyaluronic from Streptococcus equi (C) -0.9 -2.7 compare
stress BHIS with Vancomycin 0.016 mg/ml -0.9 -3.6 compare
carbon source Red Arabinan from sugar-beet (C) -0.9 -2.7 compare
mouse_post_colonization Post-colonization (Day 1) - Cage6;Mouse2 -0.9 -2.7 compare
mouse_post_colonization Post-colonization (Day 12) - Cage4;Mouse1 -0.9 -2.5 compare
mouse_post_colonization Post-colonization (Day 10) - Cage6;Mouse2 -0.9 -2.7 compare
carbon source D-Raffinose (C) -0.8 -1.8 compare
mouse_post_colonization Post-colonization (Day 12) - Cage5;Mouse4 -0.8 -2.4 compare
nitrogen source L-Glutamine (N); Varel_Bryant_medium_Glucose_DTT_NaS_noNitrogen -0.8 -2.5 compare
stress BHIS with Dimethyl Sulfoxide 10 vol% -0.8 -2.2 compare
mouse_post_colonization Post-colonization (Day 14) - Cage7;Mouse3 -0.8 -2.3 compare
carbon source Maltitol 20mM (C) -0.8 -2.6 compare
stress BHIS with Fusidic 0.002 mg/ml -0.8 -1.9 compare
nitrogen source L-Asparagine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen +1.0 +5.1 compare
carbon source Mannan from Saccharomyces cerevisiae (C) +1.1 +3.6 compare