Fitness data for BT3232 in Bacteroides thetaiotaomicron VPI-5482

gluconate 5-dehydrogenase (NCBI ptt file)
SEED: 2-deoxy-D-gluconate 3-dehydrogenase (EC 1.1.1.125)
KEGG: gluconate 5-dehydrogenase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 3.0)


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group condition fitness t score  
carbon source carbon source Mucin from porcine stomach type III 10 mg/ml -5.1 -3.5 compare
carbon source Hyaluronic from Streptococcus equi (C) -4.6 -2.7 compare
mouse_coculture cage1; mouse2; day3; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003 -4.5 -2.7 compare
carbon source Rhamnogalacturonan - from potato; autoclaved 2.5 mg/ml (C) -4.2 -2.9 compare
mouse_post_colonization Post-colonization (Day 12) - Cage2;Mouse2 -4.1 -2.7 compare
carbon source Hyaluronic from Streptococcus equi -4.0 -2.1 compare
mouse_post_colonization Post-colonization (Day 8) - Cage6;Mouse1 -4.0 -2.5 compare
stress Varel_Bryant_medium_Glucose with Furaltadone 0.1 mM -3.9 -2.3 compare
carbon source carbon source Mucin from porcine stomach type III 10 mg/ml -3.8 -2.9 compare
carbon source Rhamnogalacturonan - from potato (C) -3.6 -2.3 compare
mouse_coculture cage1; mouse2; day2; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003 -3.4 -1.9 compare
stress BHIS with perchlorate 100 mM -3.3 -2.3 compare
mouse_post_colonization Post-colonization (Day 3) - Cage2;Mouse2 -3.3 -2.8 compare
stress BHIS with Dimetridazole 0.025 mM -3.3 -2.2 compare
mouse_post_colonization Post-colonization (Day 12) - Cage3;Mouse4 -3.3 -2.0 compare
mouse_coculture cage1; mouse1; day3; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003 -3.3 -2.1 compare
mouse_post_colonization Post-colonization (Day 10) - Cage1;Mouse4 -3.2 -2.0 compare
stress 101 uM BPS, BHI 1x protoporphyrin for 24 hours. -3.1 -2.9 compare
mouse_post_colonization Post-colonization (Day 12) - Cage7;Mouse1 -3.0 -1.9 compare
carbon source Hyaluronic from Streptococcus equi (C) -3.0 -2.5 compare