Fitness data for BT3213 in Bacteroides thetaiotaomicron VPI-5482

tRNA pseudouridine synthase B (NCBI ptt file)
SEED: tRNA pseudouridine synthase B (EC 4.2.1.70)
KEGG: tRNA pseudouridine synthase B

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.6)


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group condition fitness t score  
stress BHIS with Dimethyl Sulfoxide 10 vol% -2.3 -3.0 compare
stress BHIS with perchlorate 100 mM -2.2 -3.3 compare
mouse_post_colonization Post-colonization (Day 1) - Cage4;Mouse1 -2.0 -1.9 compare
mouse_coculture cage1; mouse3; day3; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003 -2.0 -1.8 compare
stress BHIS with Dimethyl Sulfoxide 10 vol% -1.9 -2.6 compare
carbon source D-Glucose (C) with 20 amino mix -1.9 -3.5 compare
mouse_coculture cage1; mouse1; day5; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003 -1.7 -1.5 compare
carbon source D-Glucose (C) -1.7 -2.7 compare
stress BHIS with Dimethyl Sulfoxide 9 vol% -1.7 -2.7 compare
stress BHIS with perchlorate 100 mM -1.6 -2.9 compare
mouse_post_colonization Post-colonization (Day 14) - Cage1;Mouse3 +1.7 +2.0 compare
mouse_post_colonization Post-colonization (Day 14) - Cage2;Mouse2 +1.7 +3.3 compare
mouse_post_colonization Post-colonization (Day 1) - Cage6;Mouse2 +1.7 +2.4 compare
stress Varel_Bryant_medium_Glucose with Bile salts 0.25 mg/mL; pH 7 +1.7 +3.5 compare
mouse_post_colonization Post-colonization (Day 10) - Cage1;Mouse4 +1.7 +2.3 compare
mouse_recovery_after_peg Post-colonization (Day 14) - Cage4;Mouse2 +1.7 +1.5 compare
mouse_post_colonization Post-colonization (Day 14) - Cage4;Mouse4 +1.8 +2.0 compare
stress BHIS with DAMPA 60 uM +1.8 +4.2 compare
stress BHIS with Trimethoprim 0.0125 mM +1.9 +2.9 compare
stress BHIS with Trimethoprim 15 uM +2.0 +5.0 compare