Fitness data for BT2822 in Bacteroides thetaiotaomicron VPI-5482

conserved hypothetical protein (NCBI ptt file)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
mouse_coculture cage1; mouse1; day5; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003 -0.6 -2.9 compare
phage DAC19_cps8_0.1MOI -0.6 -3.1 compare
survival aerobic shaking 48 hr copy B -0.6 -2.7 compare
carbon source NAG (C) -0.5 -2.4 compare
phage HNL05_cps7_0.1MOI -0.5 -1.9 compare
phage SJC25_Acapsular_0.1MOI -0.5 -2.4 compare
survival aerobic shaking 48 hr copy A -0.5 -2.4 compare
stress BHIS with Deoxycholic 0.2 mg/ml -0.5 -2.1 compare
phage DAC16_cps7_10MOI -0.5 -2.6 compare
stress BHIS with Chenodeoxycholic 0.25 mg/ml -0.4 -2.1 compare
mouse_coculture cage1; mouse1; day4; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003 -0.4 -1.9 compare
mouse_coculture cage1; mouse2; day2; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003 -0.4 -2.0 compare
stress BHIS with Trimethoprim 15 uM -0.4 -2.2 compare
stress Varel_Bryant_medium_Glucose with Indolicidin 0.002 mg/ml -0.4 -2.1 compare
mouse_post_colonization Post-colonization (Day 1) - Cage4;Mouse3 +0.4 +2.3 compare
stress Varel_Bryant_medium_Glucose with Econazole nitrate salt 0.025 mM +0.4 +1.9 compare
carbon source D-Trehalose 20mM (C) +0.4 +2.2 compare
mouse_post_colonization Post-colonization (Day 2) - Cage2;Mouse1 +0.5 +3.0 compare
nitrogen source L-Serine (N); Varel_Bryant_medium_Glucose_DTT_noNitrogen +0.5 +2.3 compare
stress BHIS with Dimethyl Sulfoxide 9 vol% +0.5 +2.4 compare