Fitness data for BT2604 in Bacteroides thetaiotaomicron VPI-5482

conserved protein found in conjugate transposon (NCBI ptt file)
SEED: Conjugative transposon protein TraF

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.0)


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group condition fitness t score  
mouse Post-colonization (Day 7) - Cage1B;Mouse5 -1.8 -3.7 compare
mouse_peg_treatment PEG (Day 2) - Cage5;Mouse1 -1.6 -3.6 compare
stress BHIS with Chenodeoxycholic 0.25 mg/ml -1.3 -3.6 compare
carbon source Lactulose 20mM (C) -1.3 -2.5 compare
stress BHIS with Deoxycholic 0.2 mg/ml -1.2 -3.8 compare
stress BHIS with Chenodeoxycholic 0.25 mg/ml -1.1 -2.3 compare
mouse Post-colonization (Day 7) - Cage1A;Mouse1 -1.1 -2.0 compare
phage DAC20_cps8_1MOI -1.1 -2.4 compare
mouse_post_colonization Post-colonization (Day 12) - Cage5;Mouse4 -1.1 -2.1 compare
mouse Post-colonization (Day 2) - Cage1C;Mouse3 -1.1 -1.7 compare
mouse_post_colonization Post-colonization (Day 14) - Cage5;Mouse1 -1.0 -2.6 compare
carbon source Hyaluronic from Streptococcus equi -1.0 -1.8 compare
nitrogen source L-Serine (N); Varel_Bryant_medium_Glucose_DTT_NaS_noNitrogen +1.0 +2.9 compare
mouse_post_colonization Post-colonization (Day 12) - Cage3;Mouse3 +1.0 +2.9 compare
carbon source Mannan from Saccharomyces cerevisiae; autoclaved 2.5 mg/ml (C) +1.0 +4.3 compare
mouse_post_colonization Post-colonization (Day 2) - Cage7;Mouse2 +1.1 +3.0 compare
stress BHIS with Chlorpromazine 0.2 mM +1.1 +1.8 compare
carbon source a-Cyclodextrin 2.5 mg/ml (C) +1.2 +2.9 compare
stress BHIS with 5-Fluorouracil 0.1 mM +1.2 +1.7 compare
phage SJC16_cps8_10MOI +2.3 +2.0 compare