Fitness data for BT2562 in Bacteroides thetaiotaomicron VPI-5482

putative RNA polymerase ECF-type sigma factor (NCBI ptt file)
SEED: RNA polymerase ECF-type sigma factor

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
mouse_post_colonization Post-colonization (Day 2) - Cage3;Mouse2 -1.1 -4.0 compare
phage SJC15_cps8_1MOI -1.1 -2.6 compare
mouse_post_colonization Post-colonization (Day 2) - Cage3;Mouse4 -1.0 -4.0 compare
nitrogen source L-Serine (N); Varel_Bryant_medium_Glucose_DTT_noNitrogen -1.0 -3.1 compare
stress Varel_Bryant_medium_Glucose with Chlorpromazine 0.1 mM -1.0 -2.5 compare
mouse_post_colonization Post-colonization (Day 1) - Cage6;Mouse1 -0.9 -1.8 compare
mouse_post_colonization Post-colonization (Day 2) - Cage1;Mouse1 -0.9 -3.1 compare
stress BHIS with Trimethoprim 0.00625 mM -0.8 -1.9 compare
carbon source Heparin from porcine intestinal mucosa (C) -0.8 -1.6 compare
stress BHIS with Ceftazidime 0.5 mg/ml -0.8 -1.6 compare
carbon source Starch from potato (C) -0.7 -1.9 compare
stress BHIS with Paraquat dichloride 0.1 mg/ml -0.7 -1.7 compare
stress BHIS with Trimethoprim 0.00625 mM -0.7 -2.3 compare
carbon source D-Glucose (C) -0.7 -2.4 compare
mouse_post_colonization Post-colonization (Day 1) - Cage2;Mouse2 -0.7 -1.7 compare
phage HNL05_cps7_0.1MOI -0.7 -1.6 compare
mouse_peg_treatment PEG (Day 3) - Cage3;Mouse2 +0.7 +2.1 compare
stress Varel_Bryant_medium_Glucose with Ciprofloxacin Hydrochloride 0.025 mM +0.7 +3.1 compare
carbon source Mannan from Saccharomyces cerevisiae; autoclaved 2.5 mg/ml (C) +0.8 +2.3 compare
carbon source (+)-Arabinogalactan; autoclaved 2.5 mg/ml (C) +1.7 +1.8 compare