Fitness data for BT2492 in Bacteroides thetaiotaomicron VPI-5482

RNA polymerase ECF-type sigma factor (NCBI ptt file)
SEED: RNA polymerase ECF-type sigma factor
KEGG: RNA polymerase sigma-70 factor, ECF subfamily

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
mouse_peg_treatment PEG (Day 1) - Cage4;Mouse1 -1.2 -4.1 compare
mouse Post-colonization (Day 7) - Cage1C;Mouse2 -1.0 -3.5 compare
carbon source Levan - from Erwinia herbicola -1.0 -3.3 compare
mouse_post_colonization Post-colonization (Day 12) - Cage3;Mouse4 -1.0 -2.9 compare
mouse_post_colonization Post-colonization (Day 8) - Cage3;Mouse4 -0.9 -3.0 compare
stress Varel_Bryant_medium_Glucose with Indolicidin 0.002 mg/ml -0.9 -2.9 compare
carbon source D-Trehalose 20mM (C) -0.9 -3.5 compare
nitrogen source D-Glucosamine Hydrochloride (N) -0.8 -3.3 compare
stress Thallium(I) acetate 0.01 mg/ml -0.8 -3.0 compare
mouse_post_colonization Post-colonization (Day 8) - Cage6;Mouse2 -0.8 -2.4 compare
carbon source D-Mannose (C) -0.8 -2.8 compare
mouse_peg_treatment PEG (Day 1) - Cage2;Mouse1 -0.8 -3.0 compare
mouse_post_colonization Post-colonization (Day 12) - Cage5;Mouse2 -0.7 -2.8 compare
mouse_post_colonization Post-colonization (Day 14) - Cage2;Mouse2 -0.7 -3.4 compare
carbon source Maltitol 20mM (C) -0.7 -2.3 compare
mouse_post_colonization Post-colonization (Day 14) - Cage5;Mouse1 -0.7 -1.8 compare
stress BHIS with Fusidic 0.002 mg/ml -0.7 -2.1 compare
mouse_post_colonization Post-colonization (Day 14) - Cage4;Mouse4 -0.7 -2.7 compare
mouse_post_colonization Post-colonization (Day 10) - Cage1;Mouse2 -0.7 -2.1 compare
phage SJC16_cps8_1MOI +0.7 +2.6 compare