Fitness data for BT2446 in Bacteroides thetaiotaomicron VPI-5482

integrase (NCBI ptt file)
SEED: Integrase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.9)


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group condition fitness t score  
carbon source (+)-Arabinogalactan (C) -1.4 -3.5 compare
carbon source D-Trehalose 20mM (C) -1.3 -2.7 compare
carbon source Red Arabinan from sugar-beet -1.3 -2.6 compare
stress Varel_Bryant_medium_Glucose with Deoxycholic 0.2 mg/ml -1.2 -2.3 compare
carbon source Red Arabinan from sugar-beet (C) -1.2 -2.5 compare
mouse_post_colonization Post-colonization (Day 1) - Cage4;Mouse3 -1.2 -3.0 compare
carbon source D-Galactose (C) -1.1 -2.1 compare
nitrogen source L-aspartic (N) -1.0 -2.2 compare
stress Varel_Bryant medium with Chlorhexidine diacetate salt 0.0015 mM -1.0 -2.9 compare
mouse_peg_treatment PEG (Day 3) - Cage3;Mouse2 -0.9 -1.8 compare
phage SJC16_cps8_10MOI -0.9 -1.5 compare
carbon source Chondroitin sulfate A from bovine trachea; filtered 2.5 mg/ml (C) -0.9 -2.7 compare
mouse_post_colonization Post-colonization (Day 3) - Cage4;Mouse3 -0.9 -2.4 compare
nitrogen source Casamino Acids (N) -0.9 -2.5 compare
mouse_post_colonization Post-colonization (Day 10) - Cage1;Mouse4 -0.9 -2.2 compare
stress Varel_Bryant_medium_Glucose with Trimethoprim 0.0125 mM -0.9 -2.1 compare
mouse_peg_treatment PEG (Day 1) - Cage2;Mouse1 +0.9 +2.6 compare
mouse_post_colonization Post-colonization (Day 12) - Cage7;Mouse3 +0.9 +2.3 compare
stress BHIS with Rifampicin 0.000048828125 mM +1.0 +3.3 compare
mouse_peg_treatment PEG (Day 2) - Cage4;Mouse1 +1.0 +2.5 compare