Fitness data for BT2198 in Bacteroides thetaiotaomicron VPI-5482

RNA polymerase ECF-type sigma factor (NCBI ptt file)
SEED: RNA polymerase ECF-type sigma factor
KEGG: RNA polymerase sigma-70 factor, ECF subfamily

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
carbon source Maltitol 20mM (C) -1.0 -3.3 compare
stress BHIS with DAMPA 60 uM -0.8 -2.3 compare
stress BHIS with Simvastatin 30 uM -0.8 -2.6 compare
stress Varel_Bryant_medium_Glucose with Rifampicin 0.0001953125 mM -0.7 -3.7 compare
stress Varel_Bryant medium with Dibucaine 0.2 mM -0.7 -2.9 compare
phage SJC16_cps8_10MOI -0.7 -1.8 compare
stress BHIS with Dimethyl Sulfoxide 10 vol% -0.7 -2.0 compare
carbon source D-Xylose (C) -0.7 -2.3 compare
stress Varel_Bryant medium with Dimethyl Sulfoxide 2 vol% -0.7 -2.9 compare
nitrogen source Casamino Acids (N) +0.7 +2.4 compare
mouse_peg_treatment PEG (Day 1 ) - Cage1;Mouse5 +0.7 +1.6 compare
mouse_peg_treatment PEG (Day 2) - Cage4;Mouse1 +0.7 +1.8 compare
nitrogen source Glucuronamide (N) +0.7 +3.3 compare
carbon source (+)-Arabinogalactan; autoclaved 2.5 mg/ml (C) +0.7 +2.4 compare
mouse_peg_treatment PEG (Day 2) - Cage5;Mouse1 +0.7 +2.4 compare
mouse_post_colonization Post-colonization (Day 10) - Cage1;Mouse1 +0.8 +2.8 compare
stress BHIS with Dimetridazole 0.025 mM +0.8 +2.5 compare
mouse_post_colonization Post-colonization (Day 12) - Cage5;Mouse3 +0.8 +2.8 compare
stress BHIS with Thioridazine 0.025 mM +0.9 +1.8 compare
mouse_peg_treatment PEG (Day 1) - Cage3;Mouse1 +1.0 +2.4 compare