Fitness data for BT2122 in Bacteroides thetaiotaomicron VPI-5482

lysyl-tRNA synthetase (NCBI ptt file)
SEED: Lysyl-tRNA synthetase (class II) (EC 6.1.1.6)
KEGG: lysyl-tRNA synthetase, class II

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 2.5)


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group condition fitness t score  
carbon source Pectin (C) -3.8 -2.6 compare
carbon source Amylose from potato -3.7 -2.5 compare
mouse_post_colonization Post-colonization (Day 1) - Cage4;Mouse1 -3.7 -3.5 compare
mouse_post_colonization Post-colonization (Day 1) - Cage6;Mouse2 -3.5 -2.4 compare
stress BHIS with Irgasan 0.025 mM -3.2 -2.1 compare
carbon source polygalacturonic -3.2 -2.2 compare
stress BHIS with Doxycycline hyclate 0.00009765625 mM -3.0 -2.0 compare
mouse_coculture cage1; mouse2; day5; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003 -3.0 -1.5 compare
mouse_post_colonization Post-colonization (Day 12) - Cage5;Mouse3 -2.9 -2.0 compare
stress Varel_Bryant_medium_Glucose with Ramoplanin 0.003125 mM -2.7 -1.8 compare
stress BHIS with Doxycycline hyclate 0.0001953125 mM -2.7 -1.3 compare
stress BHIS with Dimetridazole 0.025 mM -2.7 -1.8 compare
stress Varel_Bryant_medium_Glucose with Sulfaquinoxaline 0.1 mM -2.6 -1.6 compare
carbon source Chondroitin sulfate A from bovine trachea (C) -2.5 -2.0 compare
stress BHIS with Dimetridazole 0.025 mM -2.5 -1.7 compare
stress BHIS with Chloride 350 mM -2.5 -2.0 compare
stress BHIS with Cephalothin 0.2 mM +2.6 +1.6 compare
stress BHIS with Chlorpromazine 0.1 mM +2.6 +2.8 compare
nitrogen source L-aspartic (N) +3.0 +4.4 compare
carbon source Lactulose 20mM (C) +3.4 +3.2 compare