Fitness data for BT1907 in Bacteroides thetaiotaomicron VPI-5482

putative RNA polymerase sigma factor RpoS (NCBI ptt file)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
mouse Post-colonization (Day 7) - Cage1B;Mouse5 -0.7 -3.2 compare
carbon source Chondroitin sulfate A from bovine trachea (C) -0.6 -3.0 compare
stress BHIS with Chenodeoxycholic 0.25 mg/ml -0.6 -2.3 compare
carbon source dextran, Mw ~200,000 (C) -0.6 -2.7 compare
mouse_post_colonization Post-colonization (Day 6) - Cage6;Mouse2 -0.5 -1.8 compare
nitrogen source L-Glutamine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen -0.5 -2.7 compare
stress BHIS with Benzethonium chloride 0.002 mM -0.5 -2.8 compare
stress BHIS with Deoxycholic 0.2 mg/ml -0.5 -2.0 compare
stress Varel_Bryant_medium_Glucose with Bile salts 0.25 mg/mL; pH 6 -0.5 -2.4 compare
carbon source Red Arabinan from sugar-beet (C) -0.5 -2.2 compare
stress BHIS with Irgasan 0.025 mM -0.5 -2.4 compare
mouse_post_colonization Post-colonization (Day 8) - Cage2;Mouse3 -0.5 -2.2 compare
stress BHIS with Oxytetracycline 0.0001953125 mM -0.5 -2.7 compare
stress BHIS with Simvastatin 30 uM -0.4 -2.0 compare
stress BHIS with Fusidic 0.002 mg/ml -0.4 -2.1 compare
carbon source Mannan from Saccharomyces cerevisiae; filtered 2.5 mg/ml (C) +0.4 +2.4 compare
control NoPhage +0.5 +3.0 compare
stress Varel_Bryant_medium_Glucose with Zinc Pyrithione 0.025 mM +0.6 +3.1 compare
stress Varel_Bryant_medium_Glucose with Sulfamethizole 0.1 mM +0.6 +2.8 compare
nitrogen source L-aspartic (N) +0.7 +3.7 compare