Fitness data for BT1817 in Bacteroides thetaiotaomicron VPI-5482

RNA polymerase ECF-type sigma factor (NCBI ptt file)
SEED: RNA polymerase sigma-54 factor RpoN
KEGG: RNA polymerase sigma-70 factor, ECF subfamily

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.2)


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group condition fitness t score  
stress BHIS with Doxycycline hyclate 0.0001953125 mM -2.0 -2.3 compare
phage DAC23_cps8_0.1MOI -1.9 -3.7 compare
phage HNL05_cps7_0.1MOI -1.9 -3.4 compare
mouse_post_colonization Post-colonization (Day 14) - Cage1;Mouse3 -1.7 -2.3 compare
phage SJC15_cps8_1MOI -1.6 -1.8 compare
stress BHIS with 5-Fluorouracil 0.1 mM -1.6 -2.2 compare
stress BHIS with perchlorate 100 mM -1.5 -3.2 compare
mouse_post_colonization Post-colonization (Day 8) - Cage5;Mouse3 -1.5 -3.0 compare
stress BHIS with Sulfamethizole 0.1 mM -1.4 -2.3 compare
stress Varel_Bryant_medium_Glucose with Ciprofloxacin Hydrochloride 0.025 mM -1.3 -2.1 compare
carbon source Levan - from Erwinia herbicola (C) -1.3 -2.4 compare
mouse_peg_treatment PEG (Day 1) - Cage3;Mouse4 -1.3 -2.5 compare
carbon source D-Trehalose 20mM (C) -1.3 -1.8 compare
stress Varel_Bryant medium with Dimethyl Sulfoxide 2 vol% -1.2 -2.5 compare
mouse_post_colonization Post-colonization (Day 1) - Cage2;Mouse2 +1.3 +2.0 compare
mouse_post_colonization Post-colonization (Day 10) - Cage6;Mouse2 +1.3 +4.2 compare
survival aerobic shaking 48 hr copy B +1.5 +2.8 compare
stress BHIS with Cephalothin 0.2 mM +1.7 +3.6 compare
mouse_post_colonization Post-colonization (Day 1) - Cage6;Mouse1 +1.8 +3.0 compare
stress BHIS with Thioridazine 0.0125 mM +2.6 +1.6 compare