Fitness data for BT1763 in Bacteroides thetaiotaomicron VPI-5482

putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file)
SEED: SusC, outer membrane protein involved in starch binding

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
carbon source Levan - from Erwinia herbicola; autoclaved 2.5 mg/ml (C) -2.4 -1.7 compare
carbon source Levan - from Erwinia herbicola; autoclaved 2.5 mg/ml (C) -2.3 -3.9 compare
carbon source Red Arabinan from sugar-beet; filtered 5 mg/ml (C) -1.0 -3.9 compare
carbon source carbon source Rhamnogalacturonan-II from apple juice concentrate 10 mg/ml -1.0 -5.9 compare
stress BHIS with Fusidic 0.002 mg/ml -1.0 -4.9 compare
carbon source Levan - from Erwinia herbicola (C) -0.9 -4.6 compare
carbon source Levan - from Erwinia herbicola (C) -0.9 -4.4 compare
carbon source carbon source Rhamnogalacturonan-II from apple juice concentrate 10 mg/ml -0.9 -6.0 compare
carbon source carbon source Rhamnogalacturonan-II from apple juice concentrate 10 mg/ml -0.9 -5.4 compare
mouse Post-colonization (Day 7) - Cage1A;Mouse1 -0.9 -3.9 compare
stress BHIS with Fusidic 0.002 mg/ml -0.9 -4.3 compare
carbon source carbon source Rhamnogalacturonan-II from apple juice concentrate 10 mg/ml -0.9 -5.5 compare
carbon source Levan - from Erwinia herbicola -0.9 -3.9 compare
carbon source Red Arabinan from sugar-beet; filtered 2.5 mg/ml (C) -0.8 -3.2 compare
carbon source Red Arabinan from sugar-beet; filtered 2.5 mg/ml (C) -0.8 -3.7 compare
stress BHIS with Simvastatin 30 uM -0.8 -3.7 compare
carbon source Red Arabinan from sugar-beet (C) -0.8 -2.9 compare
carbon source Red Arabinan from sugar-beet; filtered 2.5 mg/ml (C) -0.8 -3.4 compare
mouse_coculture cage1; mouse1; day5; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003 -0.7 -3.8 compare
carbon source Red Arabinan from sugar-beet; filtered 2.5 mg/ml (C) -0.6 -2.7 compare