Fitness data for BT1728 in Bacteroides thetaiotaomicron VPI-5482

RNA polymerase ECF-type sigma factor (NCBI ptt file)
SEED: RNA polymerase ECF-type sigma factor

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
stress Varel_Bryant_medium_Glucose with Econazole nitrate salt 0.025 mM -1.3 -3.8 compare
stress BHIS with Dimetridazole 0.00078125 mM -1.3 -3.3 compare
mouse_post_colonization Post-colonization (Day 8) - Cage7;Mouse2 -1.0 -3.7 compare
stress BHIS with Dimetridazole 0.0125 mM -1.0 -2.8 compare
stress Varel_Bryant_medium_Glucose with Vancomycin Hydrochloride from Streptomyces orientalis 0.00625 mM -1.0 -2.9 compare
stress Varel_Bryant_medium_Glucose with Benzethonium chloride 0.000390625 mM -0.9 -2.8 compare
stress Varel_Bryant_medium_Glucose with Econazole nitrate salt 0.025 mM -0.9 -2.5 compare
stress Varel_Bryant_medium_Glucose with Anhydrotetracycline 0.000390625 mM -0.8 -2.5 compare
mouse_post_colonization Post-colonization (Day 3) - Cage6;Mouse1 -0.7 -2.9 compare
stress Varel_Bryant_medium_Glucose with Ramoplanin 0.003125 mM -0.7 -2.3 compare
stress Varel_Bryant_medium_Glucose with Levofloxacin 0.0015625 mM -0.7 -2.2 compare
mouse_post_colonization Post-colonization (Day 4) - Cage7;Mouse2 -0.7 -2.9 compare
carbon source Amylopectin from Potato; autoclaved 2.5 mg/ml (C) -0.6 -2.0 compare
carbon source Laminaribiose (C) -0.6 -2.4 compare
stress BHIS with Trimethoprim 7.5 uM +0.6 +3.0 compare
mouse_post_colonization Post-colonization (Day 1) - Cage5;Mouse4 +0.7 +2.5 compare
phage SJC12_cps8_0.1MOI +0.7 +2.0 compare
stress BHIS with Doxycycline hyclate 0.0001953125 mM +0.7 +1.8 compare
mouse_peg_treatment PEG (Day 3) - Cage1;Mouse2 +0.8 +2.7 compare
nitrogen source L-Serine (N); Varel_Bryant_medium_Glucose_DTT_noNitrogen +1.1 +3.6 compare