Fitness data for BT1440 in Bacteroides thetaiotaomicron VPI-5482

TonB-dependent receptor for vancomycin (SusC-like) (from data)
Original annotation: putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file)
SEED: SusC, outer membrane protein involved in starch binding

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.3)


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group condition fitness t score  
mouse_post_colonization Post-colonization (Day 6) - Cage1;Mouse3 -1.8 -7.3 compare
mouse_post_colonization Post-colonization (Day 12) - Cage1;Mouse5 -1.7 -7.4 compare
mouse_post_colonization Post-colonization (Day 4) - Cage4;Mouse4 -1.7 -7.4 compare
mouse_post_colonization Post-colonization (Day 2) - Cage1;Mouse3 -1.5 -5.2 compare
mouse_post_colonization Post-colonization (Day 3) - Cage5;Mouse2 -1.4 -7.3 compare
mouse_post_colonization Post-colonization (Day 2) - Cage5;Mouse3 -1.4 -6.1 compare
mouse_post_colonization Post-colonization (Day 6) - Cage5;Mouse2 -1.4 -5.9 compare
mouse_post_colonization Post-colonization (Day 6) - Cage3;Mouse1 -1.4 -6.2 compare
mouse_post_colonization Post-colonization (Day 2) - Cage4;Mouse4 -1.4 -6.3 compare
mouse_peg_treatment PEG (Day 2) - Cage3;Mouse3 -1.4 -5.4 compare
mouse_post_colonization Post-colonization (Day 3) - Cage6;Mouse2 -1.4 -6.3 compare
mouse_post_colonization Post-colonization (Day 1) - Cage3;Mouse1 -1.3 -5.4 compare
mouse_post_colonization Post-colonization (Day 10) - Cage3;Mouse1 -1.3 -5.1 compare
mouse_post_colonization Post-colonization (Day 14) - Cage3;Mouse1 -1.3 -4.3 compare
mouse_peg_treatment PEG (Day 1) - Cage2;Mouse1 -1.3 -4.8 compare
mouse_post_colonization Post-colonization (Day 12) - Cage2;Mouse1 -1.3 -5.3 compare
stress BHIS with Sulfamonomethoxine 0.1 mM +2.4 +12.9 compare
stress BHIS with Vancomycin 0.016 mg/ml +4.9 +28.1 compare
stress BHIS with Vancomycin 0.016 mg/ml +6.4 +35.1 compare
stress BHIS with Vancomycin Hydrochloride from Streptomyces orientalis 0.0125 mM +6.4 +25.2 compare