Fitness data for BT1278 in Bacteroides thetaiotaomicron VPI-5482

RNA polymerase ECF-type sigma factor (NCBI ptt file)
SEED: RNA polymerase ECF-type sigma factor

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.0)


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group condition fitness t score  
carbon source D-Trehalose 20mM (C) -1.3 -2.3 compare
mouse_post_colonization Post-colonization (Day 10) - Cage5;Mouse2 -1.2 -3.1 compare
stress Varel_Bryant_medium_Glucose with Antimycin A 0.2 mM -1.2 -2.8 compare
stress Varel_Bryant_medium_Glucose with Sulfamethizole 0.1 mM -1.1 -2.3 compare
mouse_post_colonization Post-colonization (Day 1) - Cage3;Mouse1 -1.1 -2.6 compare
varel_bryant_medium_glucose Varel_Bryant_medium_Glucose -1.1 -2.4 compare
stress BHIS with Cephalothin 0.2 mM -1.1 -2.2 compare
stress Varel_Bryant_medium_Glucose with Indolicidin 0.002 mg/ml -1.1 -2.5 compare
mouse_recovery_after_peg Post-colonization (Day 14) - Cage4;Mouse2 -1.1 -2.4 compare
mouse_post_colonization Post-colonization (Day 12) - Cage7;Mouse1 -1.1 -2.3 compare
mouse_post_colonization Post-colonization (Day 6) - Cage3;Mouse4 -1.0 -2.3 compare
mouse_peg_treatment PEG (Day 2) - Cage5;Mouse1 -1.0 -2.0 compare
stress BHIS with DAMPA 60 uM +1.0 +2.6 compare
control NoPhage +1.0 +2.8 compare
nitrogen source L-Glutamine (N); Varel_Bryant_medium_Glucose_DTT_NaS_noNitrogen +1.0 +3.0 compare
stress BHIS with Chlorpromazine 0.2 mM +1.0 +2.3 compare
stress Varel_Bryant_medium_Glucose with Chlorpromazine 0.1 mM +1.0 +2.1 compare
stress Varel_Bryant_medium_Glucose with Anhydrotetracycline 0.00078125 mM +1.2 +3.8 compare
stress BHIS with Sulfaquinoxaline 0.1 mM +1.2 +2.7 compare
stress Varel_Bryant_medium_Glucose with Zinc Pyrithione 0.05 mM +1.2 +3.0 compare