Fitness data for BT1212 in Bacteroides thetaiotaomicron VPI-5482

outer membrane efflux protein (NCBI ptt file)
SEED: RND efflux system, outer membrane lipoprotein CmeC
KEGG: outer membrane channel protein TolC

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.0)

group	condition	fitness	t score
mouse_post_colonization	Post-colonization (Day 1) - Cage3;Mouse1	-1.9	-3.1	compare
phage	SJC15_cps8_1MOI	-1.9	-3.2	compare
mouse_post_colonization	Post-colonization (Day 14) - Cage7;Mouse3	-1.6	-1.9	compare
nitrogen source	Ammonium chloride (N)	-1.5	-2.0	compare
carbon source	(+)-Arabinogalactan; autoclaved 2.5 mg/ml (C)	-1.5	-2.1	compare
stress	Varel_Bryant_medium_Glucose with Levofloxacin 0.0015625 mM	-1.4	-1.8	compare
carbon source	Dextrin from potato starch; autoclaved 2.5 mg/ml (C)	-1.3	-2.5	compare
carbon source	Mucin from porcine stomach type III; autoclaved 2.5 mg/ml (C)	-1.3	-2.3	compare
carbon source	polygalacturonic (ultrapure); autoclaved 2.5 mg/ml (C)	-1.2	-2.2	compare
stress	BHIS with Levofloxacin 0.0015625 mM	-1.2	-2.1	compare
carbon source	D-Glucose 5 mg/ml (C)	-1.2	-2.3	compare
stress	Varel_Bryant_medium_Glucose with Deoxycholic 0.2 mg/ml	-1.2	-2.3	compare
stress	BHIS with Dimethyl Sulfoxide 10 vol%	-1.1	-2.0	compare
stress	BHIS with Fusidic 0.002 mg/ml	-1.1	-2.0	compare
stress	BHIS with Cephalothin 0.1 mM	-1.0	-1.7	compare
carbon source	D-Ribose (C)	+1.0	+1.5	compare
mouse	Post-colonization (Day 7) - Cage1B;Mouse5	+1.1	+1.9	compare
carbon source	Maltohexaose (C)	+1.1	+3.5	compare
survival	aerobic shaking 48 hr copy B	+1.1	+2.2	compare
stress	BHIS with Dimetridazole 0.025 mM	+1.8	+4.6	compare