Fitness data for BT1197 in Bacteroides thetaiotaomicron VPI-5482

RNA polymerase ECF-type sigma factor (NCBI ptt file)
SEED: RNA polymerase ECF-type sigma factor
KEGG: RNA polymerase sigma-70 factor, ECF subfamily

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 2.3)


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group condition fitness t score  
mouse_post_colonization Post-colonization (Day 2) - Cage3;Mouse2 -2.9 -2.0 compare
carbon source D-Galactose (C) -2.8 -4.3 compare
stress BHIS with Dimethyl Sulfoxide 10 vol% -2.8 -1.9 compare
mouse_post_colonization Post-colonization (Day 4) - Cage6;Mouse2 -2.6 -1.8 compare
mouse_post_colonization Post-colonization (Day 12) - Cage3;Mouse4 +2.3 +4.6 compare
stress Varel_Bryant_medium_Glucose with 8-hydroxy-nitroquinoline 0.05 mM +2.4 +4.9 compare
nitrogen source L-Glutamine (N); Varel_Bryant_medium_Glucose_DTT_noNitrogen +2.4 +4.3 compare
mouse_post_colonization Post-colonization (Day 1) - Cage6;Mouse2 +2.4 +5.3 compare
carbon source Lactulose 20mM (C) +2.5 +6.7 compare
mouse_post_colonization Post-colonization (Day 14) - Cage2;Mouse2 +2.7 +9.4 compare
mouse_post_colonization Post-colonization (Day 12) - Cage2;Mouse2 +2.7 +5.8 compare
carbon source Beta-Lactose 2.5 mg/ml (C) +2.8 +5.2 compare
carbon source Lactulose 20mM (C) +2.8 +6.4 compare
nitrogen source L-Asparagine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen +2.9 +5.2 compare
mouse_peg_treatment PEG (Day 3) - Cage1;Mouse2 +2.9 +5.8 compare
carbon source Beta-Lactose 2.5 mg/ml (C) +3.2 +5.9 compare
stress Varel_Bryant_medium_Glucose with Bile salts 0.5 mg/mL; pH 7 +3.5 +7.2 compare
mouse_peg_treatment PEG (Day 1 ) - Cage1;Mouse5 +3.8 +11.0 compare
stress Varel_Bryant_medium_Glucose with Bile salts 0.5 mg/mL; pH 7 +3.8 +8.2 compare
mouse_peg_treatment PEG (Day 3) - Cage2;Mouse1 +4.8 +4.8 compare