Fitness data for BT1145 in Bacteroides thetaiotaomicron VPI-5482

glucose-inhibited division protein (NCBI ptt file)
SEED: rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB
KEGG: ribosomal RNA small subunit methyltransferase G

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 2.2)


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group condition fitness t score  
stress Varel_Bryant_medium_Glucose with Chenodeoxycholic 0.25 mg/ml -3.0 -2.3 compare
carbon source Hyaluronic from Streptococcus equi (C) -3.0 -2.0 compare
carbon source amylopectin from maize -2.8 -1.9 compare
mouse Post-colonization (Day 4) - Cage1C;Mouse3 -2.8 -3.2 compare
mouse_post_colonization Post-colonization (Day 12) - Cage2;Mouse2 -2.7 -1.9 compare
mouse_post_colonization Post-colonization (Day 6) - Cage6;Mouse1 -2.7 -2.6 compare
mouse Post-colonization (Day 7) - Cage1A;Mouse1 -2.7 -1.9 compare
mouse_peg_treatment PEG (Day 1) - Cage2;Mouse1 -2.6 -2.5 compare
phage DAC19_cps8_1MOI -2.6 -1.8 compare
stress Varel_Bryant_medium_Glucose with Dimethyl Sulfoxide 0.2 vol% -2.6 -2.5 compare
mouse_post_colonization Post-colonization (Day 10) - Cage4;Mouse1 -2.6 -2.4 compare
mouse_peg_treatment PEG (Day 2) - Cage3;Mouse3 -2.6 -2.5 compare
mouse_coculture cage1; mouse3; day2; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003 -2.4 -2.1 compare
mouse_post_colonization Post-colonization (Day 1) - Cage3;Mouse1 -2.3 -2.7 compare
mouse_peg_treatment PEG (Day 1) - Cage3;Mouse4 -2.3 -2.2 compare
phage SJC25_Acapsular_0.1MOI -2.3 -2.4 compare
mouse_peg_treatment PEG (Day 1) - Cage3;Mouse1 -2.3 -1.5 compare
stress Varel_Bryant_medium_Glucose with Oxytetracycline 0.00009765625 mM -2.2 -2.0 compare
mouse_post_colonization Post-colonization (Day 10) - Cage1;Mouse4 -2.2 -1.5 compare
stress Varel_Bryant medium with Chlorpromazine 0.05 mM +2.4 +5.2 compare