Fitness data for BT0978 in Bacteroides thetaiotaomicron VPI-5482

ECF-type sigma factor (NCBI ptt file)
SEED: ECF-type sigma factor

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
mouse_post_colonization Post-colonization (Day 8) - Cage3;Mouse1 -1.3 -4.1 compare
mouse_peg_treatment PEG (Day 1) - Cage3;Mouse1 -1.1 -2.9 compare
stress Varel_Bryant medium with Dimethyl Sulfoxide 2 vol% -1.1 -2.9 compare
mouse_post_colonization Post-colonization (Day 14) - Cage3;Mouse1 -1.0 -2.8 compare
mouse_post_colonization Post-colonization (Day 12) - Cage4;Mouse1 -1.0 -2.6 compare
mouse_post_colonization Post-colonization (Day 2) - Cage6;Mouse2 -1.0 -2.7 compare
nitrogen source L-Glutamine (N); Varel_Bryant_medium_Glucose_DTT_NaS_noNitrogen -0.9 -1.9 compare
mouse_post_colonization Post-colonization (Day 10) - Cage1;Mouse1 -0.9 -2.8 compare
mouse_coculture cage1; mouse1; day2; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003 -0.9 -3.0 compare
mouse_post_colonization Post-colonization (Day 2) - Cage3;Mouse1 -0.9 -2.9 compare
carbon source polygalacturonic -0.9 -1.7 compare
stress Varel_Bryant_medium_Glucose with Zinc Pyrithione 0.05 mM -0.9 -1.7 compare
mouse_post_colonization Post-colonization (Day 2) - Cage7;Mouse1 -0.9 -2.7 compare
stress Varel_Bryant_medium_Glucose with Chlorhexidine diacetate salt 0.0015625 mM -0.8 -2.3 compare
phage SJC12_cps8_0.1MOI +0.9 +2.2 compare
stress BHIS with Dimethyl Sulfoxide 9 vol% +0.9 +2.5 compare
nitrogen source L-Asparagine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen +0.9 +2.5 compare
mouse_post_colonization Post-colonization (Day 14) - Cage1;Mouse3 +1.0 +3.0 compare
mouse_post_colonization Post-colonization (Day 12) - Cage3;Mouse4 +1.0 +3.1 compare
phage DAC16_cps7_1MOI +1.1 +2.4 compare