Fitness data for BT0885 in Bacteroides thetaiotaomicron VPI-5482

putative cation efflux pump (NCBI ptt file)
SEED: RND efflux system, membrane fusion protein CmeA

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.7)


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group condition fitness t score  
stress BHIS with Chlorpromazine 0.2 mM -2.6 -2.8 compare
stress BHIS with Trimethoprim 0.00625 mM -2.4 -2.9 compare
mouse_post_colonization Post-colonization (Day 1) - Cage5;Mouse4 -2.3 -2.6 compare
stress BHIS with 5-Fluorouracil 0.2 mM -2.2 -2.9 compare
mouse_coculture cage1; mouse3; day4; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003 -2.2 -2.8 compare
stress BHIS with Thioridazine 0.025 mM -2.1 -2.5 compare
mouse_post_colonization Post-colonization (Day 3) - Cage3;Mouse4 -2.0 -3.0 compare
mouse_post_colonization Post-colonization (Day 6) - Cage1;Mouse3 -1.9 -2.2 compare
stress BHIS with Trimethoprim 0.0125 mM -1.9 -2.2 compare
mouse_post_colonization Post-colonization (Day 2) - Cage3;Mouse1 -1.9 -2.9 compare
mouse_post_colonization Post-colonization (Day 8) - Cage7;Mouse2 -1.8 -2.1 compare
mouse_post_colonization Post-colonization (Day 8) - Cage3;Mouse2 -1.8 -2.7 compare
mouse_post_colonization Post-colonization (Day 2) - Cage5;Mouse1 -1.8 -2.0 compare
phage SJC03_cps7_0.1MOI -1.8 -2.4 compare
stress Varel_Bryant_medium_Glucose with Cephalothin 0.1 mM -1.7 -2.5 compare
stress Varel_Bryant_medium_Glucose with Trimethoprim 0.0125 mM -1.7 -1.2 compare
stress Varel_Bryant_medium_Glucose with Ceftriaxone hemi(heptahydrate) 0.1 mM -1.7 -2.4 compare
stress BHIS with Sulfamonomethoxine 0.2 mM -1.7 -1.9 compare
nitrogen source L-Glutamine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen +1.8 +2.9 compare
stress Varel_Bryant_medium_Glucose with Trimethoprim 0.025 mM +2.3 +3.8 compare