Fitness data for BT0773 in Bacteroides thetaiotaomicron VPI-5482

alpha-amylase 3 (NCBI ptt file)
SEED: Alpha-amylase (EC 3.2.1.1)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.1)


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group condition fitness t score  
carbon source L-Rhamnose (C) -2.1 -4.9 compare
carbon source L-Rhamnose (C) -1.9 -6.6 compare
stress Varel_Bryant_medium_Glucose with Zinc Pyrithione 0.05 mM -1.8 -3.5 compare
mouse_coculture cage1; mouse1; day5; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003 -1.7 -6.7 compare
mouse_coculture cage1; mouse3; day5; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003 -1.5 -5.9 compare
mouse_post_colonization Post-colonization (Day 12) - Cage5;Mouse2 -1.4 -3.4 compare
mouse_peg_treatment PEG (Day 2) - Cage3;Mouse3 -1.4 -4.1 compare
mouse_post_colonization Post-colonization (Day 12) - Cage5;Mouse3 -1.3 -3.4 compare
mouse_coculture cage1; mouse2; day5; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003 -1.3 -4.4 compare
mouse_peg_treatment PEG (Day 1) - Cage4;Mouse1 -1.3 -3.3 compare
mouse_peg_treatment PEG (Day 2) - Cage5;Mouse1 -1.2 -2.9 compare
mouse_peg_treatment PEG (Day 1) - Cage2;Mouse1 -1.2 -3.5 compare
mouse_post_colonization Post-colonization (Day 12) - Cage7;Mouse1 -1.2 -3.2 compare
carbon source B-glucan from yeast; autoclaved 2.5 mg/ml (C) -1.2 -3.5 compare
mouse_coculture cage1; mouse2; day4; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003 -1.1 -4.1 compare
carbon source D-Ribose (C) -1.1 -3.6 compare
mouse_coculture cage1; mouse3; day4; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003 -1.1 -4.0 compare
mouse_post_colonization Post-colonization (Day 3) - Cage7;Mouse2 +1.1 +5.6 compare
stress Varel_Bryant_medium_Glucose with Bile salts 0.5 mg/mL; pH 7 +1.2 +3.7 compare
stress Varel_Bryant_medium_Glucose with Bile salts 0.5 mg/mL; pH 7 +1.4 +5.5 compare