Fitness data for BT0771 in Bacteroides thetaiotaomicron VPI-5482

1,4-alpha-glucan branching enzyme (isoamylase or pullulanase type II) (NCBI ptt file)
SEED: 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18)
KEGG: 1,4-alpha-glucan branching enzyme

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 3.1)


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group condition fitness t score  
carbon source L-Rhamnose (C) -4.6 -3.1 compare
carbon source L-Rhamnose (C) -4.5 -6.9 compare
mouse_coculture cage1; mouse2; day5; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003 -4.4 -5.2 compare
mouse_coculture cage1; mouse3; day5; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003 -4.3 -5.9 compare
carbon source D-Ribose (C) -4.3 -5.0 compare
carbon source L-Fucose (C) -4.2 -6.5 compare
mouse_coculture cage1; mouse2; day4; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003 -4.0 -7.2 compare
mouse_coculture cage1; mouse3; day3; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003 -3.9 -8.6 compare
mouse_coculture cage1; mouse2; day2; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003 -3.7 -7.1 compare
carbon source L-Fucose (C) -3.6 -8.1 compare
mouse_coculture cage1; mouse3; day4; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003 -3.6 -8.4 compare
mouse_coculture cage1; mouse1; day5; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003 -3.5 -7.5 compare
carbon source D-Xylose (C) -3.5 -7.8 compare
nitrogen source D-Serine (N) -3.4 -3.3 compare
mouse_coculture cage1; mouse1; day3; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003 -3.4 -7.5 compare
mouse_coculture cage1; mouse1; day4; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003 -3.4 -8.5 compare
stress Varel_Bryant_medium_Glucose with Indolicidin 0.002 mg/ml -3.3 -5.5 compare
carbon source Stachyose - 70% (C) -3.2 -6.4 compare
mouse_post_colonization Post-colonization (Day 6) - Cage4;Mouse4 -3.2 -2.2 compare
mouse_recovery_after_peg Post-colonization (Day 3) - Cage4;Mouse2 -3.1 -3.7 compare