Fitness data for BT0304 in Bacteroides thetaiotaomicron VPI-5482

acriflavine resistance protein A precursor (NCBI ptt file)
SEED: RND efflux system, membrane fusion protein CmeA

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
mouse_post_colonization Post-colonization (Day 2) - Cage4;Mouse1 -1.2 -4.1 compare
mouse_post_colonization Post-colonization (Day 3) - Cage1;Mouse2 -1.2 -3.7 compare
mouse_post_colonization Post-colonization (Day 4) - Cage5;Mouse2 -1.1 -4.3 compare
mouse Post-colonization (Day 4) - Cage1A;Mouse3 -1.0 -3.6 compare
mouse_peg_treatment PEG (Day 3) - Cage1;Mouse2 -1.0 -2.4 compare
mouse Post-colonization (Day 2) - Cage1B;Mouse4 -1.0 -3.7 compare
phage SJC16_cps8_1MOI -1.0 -3.0 compare
mouse_post_colonization Post-colonization (Day 3) - Cage6;Mouse1 -1.0 -4.0 compare
mouse_post_colonization Post-colonization (Day 12) - Cage3;Mouse4 -0.9 -2.7 compare
mouse_post_colonization Post-colonization (Day 12) - Cage7;Mouse3 -0.9 -3.1 compare
mouse_post_colonization Post-colonization (Day 2) - Cage1;Mouse5 -0.9 -3.2 compare
carbon source D-Mannose 2.5 mg/ml (C) -0.9 -3.1 compare
mouse_post_colonization Post-colonization (Day 8) - Cage5;Mouse4 -0.9 -3.7 compare
mouse_peg_treatment PEG (Day 1) - Cage3;Mouse4 -0.9 -2.8 compare
mouse_post_colonization Post-colonization (Day 4) - Cage4;Mouse1 -0.8 -3.7 compare
mouse_peg_treatment PEG (Day 2) - Cage4;Mouse1 -0.8 -1.8 compare
phage SJC15_cps8_1MOI -0.8 -2.4 compare
mouse_post_colonization Post-colonization (Day 4) - Cage1;Mouse2 -0.8 -3.6 compare
mouse_post_colonization Post-colonization (Day 6) - Cage3;Mouse1 -0.8 -3.0 compare
stress BHIS with Fusidic 0.004 mg/ml +1.1 +3.9 compare