Fitness data for BT0188 in Bacteroides thetaiotaomicron VPI-5482

RNA polymerase ECF-type sigma factor (NCBI ptt file)
SEED: RNA polymerase ECF-type sigma factor
KEGG: RNA polymerase sigma-70 factor, ECF subfamily

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.3)


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group condition fitness t score  
stress BHIS with Dimetridazole 0.025 mM -2.3 -2.2 compare
stress copper (II) chloride 1 mM -2.0 -2.3 compare
stress BHIS with Doxycycline hyclate 0.0001953125 mM -1.9 -1.3 compare
nitrogen source L-Serine (N); Varel_Bryant_medium_Glucose_DTT_NaS_noNitrogen -1.6 -2.2 compare
carbon source D-Glucosamine Hydrochloride (C) -1.4 -2.6 compare
mouse Post-colonization (Day 4) - Cage1C;Mouse1 -1.4 -2.1 compare
carbon source D-Raffinose (C) -1.4 -3.3 compare
mouse_post_colonization Post-colonization (Day 12) - Cage3;Mouse4 +1.3 +3.3 compare
stress BHIS with Trimethoprim 0.00625 mM +1.4 +1.6 compare
carbon source dextran, Mw ~200,000; autoclaved 2.5 mg/ml (C) +1.4 +2.8 compare
mouse_post_colonization Post-colonization (Day 6) - Cage5;Mouse5 +1.4 +4.7 compare
carbon source Amylopectin from Potato; autoclaved 2.5 mg/ml (C) +1.4 +2.4 compare
carbon source Mucin from porcine stomach type III; autoclaved 2.5 mg/ml (C) +1.4 +2.9 compare
carbon source polygalacturonic (ultrapure); filtered 2.5 mg/ml (C) +1.5 +2.9 compare
stress BHIS with Irgasan 0.0125 mM +1.5 +2.2 compare
stress BHIS with Thioridazine 0.025 mM +1.5 +2.5 compare
stress Varel_Bryant_medium_Glucose with Bile salts 0.5 mg/mL; pH 7 +1.5 +2.3 compare
carbon source D-Glucose 5 mg/ml (C) +1.5 +3.1 compare
stress Varel_Bryant_medium_Glucose with Thioridazine 0.025 mM +1.5 +2.2 compare
stress BHIS with 5-Fluorouracil 0.1 mM +1.6 +2.3 compare