Fitness data for BT0162 in Bacteroides thetaiotaomicron VPI-5482

penicillin-binding protein 1C (PBP-1c) (NCBI ptt file)
SEED: Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)
KEGG: penicillin-binding protein 1C

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
stress BHIS with Lithocholic 0.4 mg/ml -0.9 -3.0 compare
pH Varel_Bryant_medium_Glucose; pH 6 -0.9 -3.8 compare
stress BHIS with Chenodeoxycholic 0.25 mg/ml -0.8 -3.0 compare
stress BHIS with Cephalothin 0.1 mM -0.8 -2.8 compare
stress BHIS with Lithocholic 0.4 mg/ml -0.8 -2.2 compare
carbon source a-Cyclodextrin 2.5 mg/ml (C) -0.8 -2.3 compare
mouse; vehicle Stool_Day6_Mouse2 -0.8 -1.8 compare
mouse_peg_treatment PEG (Day 2) - Cage5;Mouse1 -0.8 -2.3 compare
mouse; zymosan and methotrexate Stool_Day3_Mouse16 -0.7 -2.5 compare
mouse_post_colonization Post-colonization (Day 10) - Cage5;Mouse3 -0.7 -2.4 compare
survival aerobic shaking 48 hr copy B -0.7 -1.8 compare
carbon source Glycogen; autoclaved 2.5 mg/ml (C) -0.7 -2.2 compare
mouse_post_colonization Post-colonization (Day 1) - Cage2;Mouse2 -0.7 -2.1 compare
stress Varel_Bryant medium with Sulfaquinoxaline 0.01 mM -0.7 -2.7 compare
carbon source Hyaluronic from Streptococcus equi -0.7 -1.7 compare
stress Varel_Bryant_medium_Glucose with Trimethoprim 0.025 mM +0.7 +1.8 compare
stress Varel_Bryant_medium_Glucose with Chlorpromazine 0.05 mM +0.8 +3.3 compare
carbon source D-Trehalose 20mM (C) +0.8 +2.6 compare
stress Varel_Bryant_medium_Glucose with Sulfaquinoxaline 0.2 mM +0.8 +3.6 compare
stress Varel_Bryant_medium_Glucose with Benzethonium chloride 0.000390625 mM +0.9 +3.9 compare