Fitness data for BT0088 in Bacteroides thetaiotaomicron VPI-5482

conserved protein found in conjugate transposon (NCBI ptt file)
SEED: Conjugative transposon protein TraL

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.4)


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group condition fitness t score  
mouse Post-dosage t1 (Day 1) - Cage1C;Mouse1 -2.8 -2.9 compare
mouse_post_colonization Post-colonization (Day 14) - Cage7;Mouse3 -2.6 -1.9 compare
mouse_peg_treatment PEG (Day 2) - Cage4;Mouse1 -2.2 -2.2 compare
phage DAC19_cps8_0.1MOI -2.1 -3.1 compare
phage SJC16_cps8_10MOI -2.0 -1.6 compare
phage DAC15 _cps3_0.1MOI -2.0 -3.1 compare
mouse_post_colonization Post-colonization (Day 6) - Cage6;Mouse2 -1.9 -2.6 compare
mouse_coculture cage1; mouse1; day5; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003 -1.8 -3.0 compare
stress BHIS with Thioridazine 0.0125 mM -1.8 -1.7 compare
stress BHIS with Lomefloxacin 0.025 mM -1.8 -2.3 compare
mouse_peg_treatment PEG (Day 3) - Cage2;Mouse1 -1.7 -1.6 compare
stress BHIS with Cephalothin 0.625 mg/ml -1.6 -1.4 compare
carbon source Hyaluronic from Streptococcus equi -1.6 -2.2 compare
phage HNL05_cps7_0.1MOI -1.6 -2.0 compare
mouse_coculture cage1; mouse3; day4; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003 -1.5 -2.8 compare
mouse_coculture cage1; mouse1; day2; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003 -1.5 -2.3 compare
mouse Post-colonization (Day 7) - Cage1B;Mouse5 -1.4 -1.4 compare
carbon source D-Glucose (C) +1.4 +1.9 compare
carbon source Beta-Lactose (C) +1.4 +2.5 compare
nitrogen source L-Glutamine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen +1.6 +2.3 compare