Fitness for 1 genes in Xanthomonas campestris pv. campestris strain 8004

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	Xcc-8004.401.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-3.9
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-3.5
in planta mesophyll	Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=3_days	-3.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-3.1
in planta xylem	Xylemvessel barcodes T0L2P4	-3.1
carbon source	D-Glucose 16.67 mM (C)	-2.8
carbon source	D-Fructose 16.67 mM (C)	-2.5
supernatant control:fungal media	R2A with Vogels_fungal_media 0.2X	-2.3
carbon source	Pectin from apple 2 g/L (C)	-2.3
in planta	1664 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together)	-2.1
in planta xylem	Xylemvessel barcodes Location 3 4 dpi (25 plantes)	-2.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-1.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-1.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-1.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-1.5
in planta xylem	Xylemvessel barcodes Location 2 6 dpi (25 plantes)	-1.4
in planta	1600 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together)	-1.4
in planta xylem	Xylemvessel barcodes Location 3 4 dpi (25 plantes)	-1.4
in planta xylem	Xylemvessel barcodes Location 3 6 dpi (25 plantes)	-1.3
r2a control	R2A control	-1.2
in planta mesophyll	Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=2_days	-1.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-1.2
supernatant	Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X	-1.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-1.1
carbon source	Citric Acid 10mM (C)	-1.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-1.1
clovis xylem sap	Clovis xylem sap	-1.0
supernatant	Supernatant; Pseudomonas fluorescens CFPB 13502 grown in 0.1x TSB, 0.4x	-1.0
in planta mesophyll	Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=2_days	-0.9
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.9
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