Fitness for 1 genes in Herbaspirillum seropedicae SmR1

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Top 30 experiments (either direction), sorted by average fitness

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Group Condition HSERO_RS23845
carbon source D,L-Lactate (C) -0.5
carbon source L-Rhamnose (C) -0.4
carbon source D,L-Lactate (C) -0.4
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4
carbon source D-Ribose (C) -0.4
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB -0.4
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB -0.4
carbon source D-Gluconic Acid (C) -0.4
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB -0.3
stress nitrate 200 mM -0.3
carbon source L-Lactate (C) -0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.3
nutrient casaminos -0.3
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.3
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 8 days +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.3
micoeukaryotes Dictyostellum sp.mixed culture-2 +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.3
plant Control soil assay; outgrowth in LB +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.3
agar plate interaction control Taped volatile agar plate with no fungus +0.4
stress Thallium(I) acetate 0.001 mg/ml +0.4
control NoPredeControl +0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.5
micoeukaryotes C.elegans, mixed culture-1 +0.6
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HSERO_RS23845