Fitness for 1 genes in Herbaspirillum seropedicae SmR1

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Group Condition HSERO_RS22480
carbon source L-mannose (C) -3.8
carbon source L-mannose (C) -3.7
carbon source D-Mannose (C) -3.5
carbon source D-Mannose (C) -3.0
carbon source D-Xylose (C) -1.3
carbon source D-Xylose (C) -1.0
vitamin No vitamins t2 -0.9
carbon source D-Glucose-6-Phosphate (C) -0.9
vitamin With vitamins t2 -0.9
carbon source D-Glucose (C) -0.8
carbon source D-Glucose (C) -0.8
carbon source D-Glucose-6-Phosphate (C) -0.8
carbon source L-Rhamnose (C) -0.7
carbon source D-Glucose (C) -0.7
carbon source D-Ribose (C) -0.7
supernatant control Vogels_fungal_media; pH 5.5 -0.6
carbon source D-Ribose (C) -0.6
r2a control R2A control -0.6
nitrogen fixation D-Glucose (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic; 8 days -0.6
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB -0.6
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM -0.5
carbon source L-Proline (C) -0.5
carbon source D-Glucose (C) -0.5
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM -0.5
vitamin With vitamins t1 +0.5
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.5
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 3 days +0.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.5
carbon source L-Fucose (C) +0.7
carbon source L-Fucose (C) +0.7
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HSERO_RS22480