Fitness for 1 genes in Herbaspirillum seropedicae SmR1

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	HSERO_RS22080
plant	Control soil assay; outgrowth in LB	-0.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.5
carbon source	D-Glucose (C)	-0.5
control	NoPredeControl	-0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-0.4
nitrogen source	Ammonium chloride (N); low aeration	-0.4
plant	Control soil assay; outgrowth in LB	-0.4
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.4
stress	Fusidic 0.025 mg/ml	-0.3
nitrogen source	Ammonium chloride (N); low aeration	-0.3
stress	Cisplatin 0.003 mg/ml	-0.3
agar plate interaction control	Taped volatile agar plate with no fungus	+0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.4
supernatant control	Vogels_fungal_media 0.1X	+0.4
carbon source	L-Fucose (C)	+0.4
carbon source	D-Glucose-6-Phosphate (C)	+0.4
plant	Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB	+0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.4
carbon source	a-Ketoglutaric (C)	+0.4
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X	+0.4
carbon source	L-Lactate (C)	+0.5
carbon source	Glycerol (C)	+0.5
carbon source	m-Inositol (C)	+0.6
carbon source	D-Gluconic Acid (C)	+0.6
carbon source	D-Galactose (C)	+0.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	+0.7
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+0.7
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