Fitness for 1 genes in Herbaspirillum seropedicae SmR1

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	HSERO_RS21570
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB	-1.6
carbon source	L-mannose (C)	-0.7
carbon source	D-Mannose (C)	-0.7
carbon source	D-Mannose (C)	-0.7
carbon source	Carbon source 2-Deoxy-D-Ribose 5 mM	-0.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-0.5
supernatant control:fungal media	R2A with Vogels_fungal_media 0.8X	-0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-0.5
carbon source	L-Proline (C)	-0.5
plant	Control soil assay; outgrowth in LB	-0.5
stress	sodium fluoride 100 mM	-0.5
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	-0.4
carbon source	D,L-Lactate (C)	+0.4
carbon source	L-Glutamine (C)	+0.5
micoeukaryotes	C.elegans, mixed culture-1	+0.5
carbon source	Xylitol (C)	+0.5
carbon source	D-Galactose (C)	+0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.5
plant	Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB	+0.5
carbon source	D-Glucose (C)	+0.5
carbon source	D-Gluconic Acid (C)	+0.6
stress	Cobalt chloride 0.2 mM	+0.6
carbon source	L-Proline (C)	+0.6
carbon source	D-Gluconic Acid (C)	+0.6
carbon source	D-Galactose (C)	+0.6
carbon source	L-Fucose (C)	+0.7
supernatant control	Vogels_fungal_media; pH 5.5	+0.8
carbon source	succinate (C)	+0.9
carbon source	L-Arabinose (C)	+1.1
plant	Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB	+1.2
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