Fitness for 1 genes in Herbaspirillum seropedicae SmR1

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Group Condition HSERO_RS20815
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -1.4
control NoPredeControl -1.1
stress Cisplatin 0.003 mg/ml -1.1
stress Fusidic 0.025 mg/ml -1.0
nitrogen source nitrate (N); low aeration -0.9
carbon source L-Fucose (C) -0.9
carbon source Glycerol (C) -0.8
nutrient Min media with glucose -0.8
carbon source D,L-Malic Acid (C) -0.7
carbon source L-Rhamnose (C) -0.6
carbon source D-Mannitol (C) -0.6
carbon source D-Galactose (C) -0.6
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB +0.6
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.6
nitrogen fixation L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days +0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.7
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.7
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM +0.7
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB +0.7
micoeukaryotes Dictyostellum sp.mixed culture-2 +0.7
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.7
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM +0.8
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.8
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB +0.8
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.9
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.9
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +1.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +1.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +2.3
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HSERO_RS20815