Fitness for 1 genes in Herbaspirillum seropedicae SmR1

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	HSERO_RS19325
carbon source	D-Xylose (C)	-5.6
carbon source	D-Xylose (C)	-4.9
carbon source	D-Xylose (C)	-4.7
carbon source	L-Fucose (C)	-2.1
carbon source	L-Fucose (C)	-1.9
plant	Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB	-0.7
plant	Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB	-0.6
carbon source	L-Rhamnose (C)	-0.6
carbon source	L-Rhamnose (C)	-0.6
carbon source	L-Rhamnose (C)	-0.6
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X	-0.5
plant	Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB	-0.5
plant	Control soil assay; outgrowth in LB	-0.5
nitrogen source	Ammonium chloride (N); low aeration	-0.5
nitrogen source	nitrate (N); high aeration	-0.5
nitrogen source	nitrate (N); low aeration	-0.5
nitrogen source	Ammonium chloride (N); high aeration	-0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.5
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X	-0.4
nutrient	casaminos	-0.4
carbon source	D-Mannitol (C)	-0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.4
nitrogen source	nitrate (N); low aeration	-0.4
supernatant control:fungal media	R2A with Vogels_fungal_media 0.8X	-0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	+0.6
carbon source	D-Ribose (C)	+1.0
carbon source	D-Ribose (C)	+1.2
carbon source	L-Fucose (C)	+2.2
carbon source	L-Fucose (C)	+2.2
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