Fitness for 1 genes in Herbaspirillum seropedicae SmR1

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	HSERO_RS18570
carbon source	D-Glucose (C)	-0.3
agar plate interaction	Taped volatile agar plate with Trichoderma atroviridae IMI	-0.3
nutrient	Min media with glucose	+0.2
micoeukaryotes	Acanthamoeba sp., muxed culture-2	+0.2
nutrient	Min media with glucose	+0.2
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	+0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.2
plant	Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB	+0.3
supernatant control:fungal media	R2A with Vogels_fungal_media 0.8X	+0.3
supernatant control:fungal media	R2A with Vogels_fungal_media 0.8X	+0.3
micoeukaryotes	Acanthamoeba sp., muxed culture-1	+0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	+0.3
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X	+0.3
nutrient	L-Histidine	+0.3
plant	Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB	+0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	+0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.3
plant	Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB	+0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+0.3
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.4
nutrient	casaminos	+0.4
r2a control	R2A control	+0.4
nutrient	L-Serine	+0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+0.5
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.5
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